Desktop · high volume

US payroll that doesn’t slow down at 5,000 employees.

Keepsync Payroll is a desktop application built for large US employers and service bureaus — federal, state and local tax handling, guided employee setup that gets the compliance details right, and pay runs that stay fast at scale. Here’s the app.

Keepsync Payroll dashboard
Built for large employers

A payroll system, not a paycheck calculator

Keepsync Payroll separates calculation, tax authority, approval, payment and compliance into controlled stages — so every result can be explained, reconstructed and corrected without rewriting history.

Governed tax engine

Rates, thresholds, caps and effective dates come from versioned tax packages and database authority — never hardcoded — so tax-law changes ship as content updates, not code rewrites, and every result records which version produced it.

Multi-jurisdiction architecture

Federal, state, county, city and school-district taxes handled with per-employee taxability, frozen YTD authority and explicit reciprocity and credit decisions — not assumptions made from geography.

Immutable payroll evidence

Every calculation keeps its exact inputs, package versions and decisions. Results can be reconstructed and defended, and corrections create new controlled attempts rather than overwriting the past.

Fail-closed compliance

An unresolved jurisdiction, taxability, YTD or evidence gap blocks processing rather than silently guessing — because confident-but-wrong payroll is the expensive kind.

Controlled payments

Paper checks and direct deposit (ACH / NACHA) are modeled as governed, auditable payment authorities with reprint control and crash-safe issuance — not one-click export buttons.

Built to scale

Bulk, set-oriented data loading and a pure in-memory calculation core keep pay runs fast from 1,000 to 5,000 employees, without turning every employee or jurisdiction into a separate database round trip.

Federal Form 941 and Form 940 are built in; W-2/W-3 and expanded state and local filing are in active development. Payroll data stays on your own hardware, under your own policies.

Multi-company

One app, every company you run payroll for

Switch between companies from a single install — built for service bureaus and groups running payroll for many entities. Each company keeps its own legal employer, EIN, rules and employees, and switching is guarded by a confirmation so unsaved work is never lost by accident.

  • Many companies, one install
  • Per-company EIN & rules
  • Guarded company switch
  • Isolated employee lists
Keepsync Payroll multi-company switch
Payroll setup

Set the company rules once — every run stays consistent

Before you pay anyone, Keepsync locks in the company-level rules that keep payroll consistent and reviewable: the approval policy, the legal employer and federal EIN, and the regular earning type and currency. With setup marked complete, employee pay profiles can be configured against a known, stable foundation.

  • Approval policy
  • Legal employer & EIN
  • Regular earning & currency
  • Effective dating
Keepsync Payroll company setup
Employees

Onboard employees with a guided profile

Add and manage every employee for the current company from one list. A focused, step-by-step editor captures personal information, contact details and identifiers — the groundwork for an accurate pay profile — without burying you in a single overwhelming form.

  • Central employee list
  • Step-by-step editor
  • Work & personal contacts
  • Activate / deactivate
Keepsync Payroll employee editor
Employee pay profile

Employment, pay and tax — in five focused steps

The heart of accurate payroll. A five-step wizard walks through employment, compensation, payroll taxes and the Federal W-4, then a review. The payroll-tax step confirms Social Security and Medicare treatment, the additional-Medicare threshold, and whether prior wages carry into the year. The W-4 step captures the modern form — filing status, dependent credits, other income, deductions and extra withholding — with a certification that the election came from the employee.

  • 5-step guided setup
  • FICA & Medicare treatment
  • Prior-wage carry-in
  • Modern Federal W-4
  • Certification on record
Keepsync Payroll taxes step
Keepsync Payroll Federal W-4 step
Ready for payroll

Reviewed, approved, and ready to pay

When a profile is complete, Keepsync summarizes it on one screen — employment, compensation, payroll-tax applicability and W-4 evidence — and marks it ready for payroll. Every figure is traceable and approved before a single paycheck is cut, which is exactly what an auditor, or your own year-end, will ask for.

  • One-screen summary
  • Approval before pay
  • Traceable W-4 evidence
  • Straight into Run Payroll
Keepsync Payroll pay profile ready
The payroll lifecycle

Ten controlled stages, one clean trail

Payroll runs as a sequence of governed stages — each a boundary for validation, approval and audit — so a problem is easy to locate and a correction never rewrites the past.

1
Company & employee authority

Multi-company context, legal employers, work assignments and payroll eligibility.

2
Pay schedule authority

Governed schedules and deterministic pay-occurrence generation.

3
Payroll initiation

Each run is backed by an occurrence with a frozen employee population.

4
Input preparation

Required inputs are finalised before calculation, so results stay reconstructable.

5
Calculation

Multi-employee calculations run against controlled inputs and tax authority.

6
Exception workflow

Incomplete or blocked payroll is made visible before approval.

7
Review & approval

Review and approval are separate authorities, for accountability.

8
Payment preparation

Approved payroll becomes eligible for checks or direct deposit.

9
Payment issuance

Checks and ACH/NACHA artifacts are created through controlled publication.

10
Tax liability & compliance

Calculated taxes feed governed liabilities, due dates and filings.

Payments

Getting money out, under control

Paying people is where mistakes cost real money, so issuance is a governed, auditable authority — not a one-click export.

Paper checks

A cheque run is an immutable print-job authority — issued once, and reconciled rather than guessed at if a print run is interrupted.

  • Ordered, immutable print-job selection
  • Separate, restrictable reprint authority
  • Crash-safe PDF creation and reconciliation
  • Professional paycheck, stub and voucher rendering

Direct deposit · ACH / NACHA

Direct deposit is a controlled payment authority with employee banking details protected end to end.

  • Protected employee banking destinations
  • ACH funding and payment authority
  • NACHA-compatible bank-file preparation
  • Traceable back to the exact approved payroll
Enterprise, security & scale

Built like commercial software, not a script

Multi-company operation

Run many legal employers with an explicit current-company context and shared master data.

Roles, review & approval

Permission-aware workflows separate setup, execution, review, approval and compliance access.

Encrypted banking & secrets

Employee bank details and employer account identifiers are held as protected, encrypted secrets.

Tamper-evident audit

Immutable authority and canonical digests make inconsistent replay or tampering detectable.

Migration & backup discipline

Alembic-governed schema, upgrade/downgrade testing, automatic backups and update rollback.

Your hardware, your control

Runs on-premise, so sensitive payroll and banking data stay under your own policies.

Compliance, built in the right order

What’s here today — and what’s next

Federal filing sits on a governed liability foundation. Everything rolling out next is engineered on that same base, so it inherits the same immutable evidence and fail-closed compliance.

Available today

Engineered and in the product now.

  • Scheduled payroll workflow — prepare, review, approve, pay
  • Paper check issuance with reprint control
  • Direct deposit — ACH funding and NACHA files
  • Federal Form 941 (quarterly) architecture & rendering
  • Federal Form 940 (FUTA) architecture & rendering
  • Multi-company, multi-employer operations

Rolling out next

In active development, on the same foundation.

  • W-2 / W-3 annual wage & tax reporting
  • Expanded state & local filing and remittance
  • Tax & Compliance Center — guided, due-date-driven next actions
  • Bank acknowledgments, returns & richer settlement

Roadmap items are in active development and described as in-progress until they ship.

Pricing

Pay for scale, not for features

Every plan is the complete payroll software — higher tiers add volume pricing, priority support and onboarding, not features. A flat annual base per company, plus a per-employee rate. No per-run or per-filing fees, nothing hidden.

No hidden chargesNo setup fees14-day free trialCancel anytime

Standard

$1,200/yr
+ $24 / employee / year
One company, up to about 1,000 employees.
  • Complete payroll software
  • Federal, state & local tax
  • FICA, W-4, multi-state & garnishments
  • Direct-deposit files, forms & reports
  • Email support
Most popular

Pro

$2,400/yr
+ per employee, volume-banded
  • First 1,000$24 ea
  • 1,001–2,500$18 ea
  • 2,501–5,000$14 ea
High volume, 1,000–5,000 employees.
  • The same complete software
  • Priority support
  • Assisted onboarding
  • Multi-year discount eligible

Bureau

Custom
Service bureaus & multi-company groups, 5,000+ employees.
  • Everything in Pro
  • Multi-company management
  • Per-company volume pricing
  • Dedicated support
Contact us
300 employees$8,400 / year
3,000 employees$60,400 / year · ~$1.68 /emp/mo
5,000 employees$88,400 / year · ~$1.47 /emp/mo

Still a fraction of per-employee cloud payroll. Multi-year licensing (2-year −10%, 3-year −15%) and a one-time perpetual licence with annual maintenance are available for enterprise buyers — ask us.

See Keepsync Payroll with your own company.

Tell us your headcount and the states you run, and we’ll set you up with a trial sized to your operation.

Talk to us

Book a 30-minute demo

Pick a time that suits you and we’ll walk you through Keepsync Payroll, answer your questions, and help you plan a migration or rollout — no obligation.